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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015815476.1_cds_XP_016498344.1_12379
CDS Infomation

[gene=LOC107817080] [db_xref=GeneID:107817080] [protein=shaggy-related protein kinase kappa-like] [protein_id=XP_016498344.1] [location=join(52590..52736,53594..53686,53763..53822,53911..54183,55015..55089,55913..55969,56059..56199,56287..56337,57099..57194,58206..58289,58379..58481,59693..59781)] [gbkey=CDS]
Sequence

ATGGCGTCCACTGGCGTTGGCCATGGAGGAGCAGGCAGTTCTAGAAGTGCTAATGGATTC
AAGAGTTCATCTAGTTCAGTCGACTGGCTGGGAAGAGAGATGCTTGAGATGAGGTTGAGA
GACAGGGTGGACCATGATGATGACAGGGACAGTGAACCAGATATAATTGATGGTGTGGGT
GCAGAAACAGGGCATGTTATTAGAACCAGTATTGGTGGTCGAAATGGTCAACCCAAGCAG
AATGTCAGTTATATAGCAGAACACGTGGTTGGAACAGGTTCTTTTGGTGTGGTTTTTCAG
GCAAAATGCAGAGAGACTGGAGAGATTGTGGCAATTAAGAAGGTTCTTCAAGATAAGCGA
TACAAGAACAGAGAATTGCAGATTATGCAAATGTTGGATCATCCTAATATTGTTGCTCTC
AAACACTCTTTCTTCTCAACAACAGACAAGGAAGAAGTATACCTCAACCTTGTCCTTGAA
TTTGTTCCAGAATCTGTCAACCGTATTGCAAGACAATACAACAGAATGAATCAGAAGATG
CCACTGATATACGCCAAACTCTATACCTATCAGATATGCAGGGCGCTGGCTTATATTCAT
AACTGTATTGGCATCTGTCACCGTGATATCAAGCCTCAGAATTTACTGGTAAATCCACAC
ACGCATCAGCTGAAGCTTTGTGATTTTGGAAGTGCAAAAGTTTTGGTGAAAGGTGAACCC
AATGTGTCATATATCTGCTCGAGATATTATCGTGCCCCTGAACTCATATTTGGTGCCACC
GAATACACAACAGCTATTGATATTTGGTCTACAGGTTGTGTAATGGCTGAGTTACTTCTT
GGACAGCCATTGTTTCCTGGAGAGAGTGGGGTTGACCAATTAGTAGAGATTATAAAGGTT
TTGGGGACACCTACTAGAGAGGAGATAAAATGCATGAATCCTAACTACACCGAGTTTAAA
TTTCCACAAATAAAGCCACACCCATGGCACAAGGTTTTTCAGAAGCGATTGCCTCCAGAA
GCGGTTGACCTGTTGTGTCGGTTTTTCCAGTATTCACCCTATTTGAGATGCACTGCTTTG
GAGGCTTGTATTCATCCATTCTTTGATGAGTTGAGGGATCCTAATACCCGTCTTCCTAAT
GGTCGCCCTCTTCCACCACTTTTCAATTTCAAGCCGCAAGAGCTCACTGGAATTCCTCCT
GAAACTCTCCAGCGCCTCATTCCAGAACATGCTCGAAGACAGAATTTATTCATGGCTTTA
CGATCCTAG

Peptide Sequence

PEP ID

XP_016498344.1
PEP Infomation

PREDICTED: shaggy-related protein kinase kappa-like [Nicotiana tabacum]
Sequence

MASTGVGHGGAGSSRSANGFKSSSSSVDWLGREMLEMRLRDRVDHDDDRDSEPDIIDGVG
AETGHVIRTSIGGRNGQPKQNVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKR
YKNRELQIMQMLDHPNIVALKHSFFSTTDKEEVYLNLVLEFVPESVNRIARQYNRMNQKM
PLIYAKLYTYQICRALAYIHNCIGICHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEP
NVSYICSRYYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKV
LGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLLCRFFQYSPYLRCTAL
EACIHPFFDELRDPNTRLPNGRPLPPLFNFKPQELTGIPPETLQRLIPEHARRQNLFMAL
RS

Transcript Sequence

Gene sequence data has not been registered.